Package: MANCIE 1.4
MANCIE: Matrix Analysis and Normalization by Concordant Information Enhancement
High-dimensional data integration is a critical but difficult problem in genomics research because of potential biases from high-throughput experiments. We present MANCIE, a computational method for integrating two genomic data sets with homogenous dimensions from different sources based on a PCA procedure as an approximation to a Bayesian approach.
Authors:
MANCIE_1.4.tar.gz
MANCIE_1.4.zip(r-4.5)MANCIE_1.4.zip(r-4.4)MANCIE_1.4.zip(r-4.3)
MANCIE_1.4.tgz(r-4.4-any)MANCIE_1.4.tgz(r-4.3-any)
MANCIE_1.4.tar.gz(r-4.5-noble)MANCIE_1.4.tar.gz(r-4.4-noble)
MANCIE_1.4.tgz(r-4.4-emscripten)MANCIE_1.4.tgz(r-4.3-emscripten)
MANCIE.pdf |MANCIE.html✨
MANCIE/json (API)
NEWS
| # Install 'MANCIE' in R: |
| install.packages('MANCIE', repos = c('https://wtwt5237.r-universe.dev', 'https://cloud.r-project.org')) |
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 9 years agofrom:543e91218c. Checks:OK: 7. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Sep 16 2024 |
| R-4.5-win | OK | Sep 16 2024 |
| R-4.5-linux | OK | Sep 16 2024 |
| R-4.4-win | OK | Sep 16 2024 |
| R-4.4-mac | OK | Sep 16 2024 |
| R-4.3-win | OK | Sep 16 2024 |
| R-4.3-mac | OK | Sep 16 2024 |
Exports:manciesummarize_mat
Dependencies:
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Matrix Analysis and Normalization by Concordant Information Enhancement | mancie |
| The demo dataset for the 'MANCIE' package | ann_DNase ann_exp DNase exp mancie_example |
| Summarize information in the supplementary matrix | summarize_mat |
